3-prime FGID data
6ceeaa86-9ceb-4582-b390-6d4dd6ff0572
89,849
a064d795-3b77-44ae-9fb5-beb57c567443
66 years old female - Fresh PBMCs (3 days post-intubation)
ea786a06-5855-48b7-80d7-0313a21a2044
4,792
29f92179-ca10-4309-a32b-d383d80347c1
66 years old female - Fresh PBMCs (4 days post-intubation)
ed9e9f96-4f08-49d2-bef5-b2c29adf3edc
5,696
29f92179-ca10-4309-a32b-d383d80347c1
82 years old female - Fresh PBMCs (1 day post-intubation)
8a554710-08bc-4005-87cd-da9675bdc2e7
4,232
29f92179-ca10-4309-a32b-d383d80347c1
A (Balanced) Bone Marrow Reference Map of Hematopoietic Development
cd2f23c1-aef1-48ae-8eb4-0bcf124e567d
263,159
f6c50495-3361-40ed-a819-fb9644396ed9
A multi-tissue single-cell tumor microenvironment atlas
b617ee1b-f8c8-4de9-b82b-e803ab93550d
391,963
3f7c572c-cd73-4b51-a313-207c7f20f188
A single-cell and spatially-resolved atlas of human breast cancers
9fddb063-056d-4202-8b8a-4b0ee531d3ce
100,064
dea97145-f712-431c-a223-6b5f565f362a
A single-cell atlas of the healthy breast tissues reveals clinically relevant clusters of breast epithelial cells
de985818-285f-4f59-9dbd-d74968fddba3
31,696
c9706a92-0e5f-46c1-96d8-20e42467f287
Activated PBMCs - Expanded cohort CITE-seq
3c75a463-6a87-4132-83a8-c3002624394d
95,064
bf325905-5e8e-42e3-933d-9a9053e9af80
Airway
edc8d3fe-153c-4e3d-8be0-2108d30f8d70
236,977
03f821b4-87be-4ff4-b65a-b5fc00061da7
All
13149914-ea03-4f01-8bf6-b793b667127b
1,665,937
4d8fed08-2d6d-4692-b5ea-464f1d072077
All Cells
16023185-de21-4c0d-a9c8-73abdd52d142
370,115
4d82bd8e-8827-410b-8fc7-685b7dd92585
All annotated cells from infection 1
2ac76f1b-43ef-4271-8686-2f165570989f
48,226
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All annotated cells from infection 2
7f7faf6b-f11d-4f07-bc1c-188a4472748d
134,076
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All annotated cells from infection 3
7b55fe5c-d5c8-48e0-a1a3-54c5b9074f3f
125,530
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All annotated cells from infection 4
7c497c66-c2e2-4291-8b96-339e5e65f314
76,298
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All cell types of human eye
e6dad530-418b-47f9-af6e-472e56a7b314
100,055
939769a8-d8d2-4d01-abfc-55699893fd49
All cells and nuclei
093d3bfe-6f0f-4ac0-a7a1-829f94d0a49f
193,108
c1241244-b22d-483d-875b-75699efb9f3c
All cells from human liver dataset
e84f2780-51e8-4cfa-8aa0-13bbfef677c7
167,598
74e10dc4-cbb2-4605-a189-8a1cd8e44d8c
All donors all cell states (in vivo)
74cff64f-9da9-4b2a-9b3b-8a04a1598040
325,665
e2c257e7-6f79-487c-b81c-39451cd4ab3c
All — Cells of the adult human heart
d4e69e01-3ba2-4d6b-a15d-e7048f78f22e
486,134
b52eb423-5d0d-4645-b217-e1c6d38b2e72
Amacrine cells of the human fovea and peripheral retina
5cdbb2ea-c622-466d-9ead-7884ad8cb99f
13,607
1d1c7275-476a-49e2-9022-ad1b1c793594
An integrated cell atlas of the human lung in health and disease (full)
9f222629-9e39-47d0-b83f-e08d610c7479
2,282,447
6f6d381a-7701-4781-935c-db10d30de293
Astro - neocortex: Human variation study (HVS)
ea95cdd5-cf7e-4d5d-a0bd-032776d32ae5
16,319
35928d1c-36fc-4f93-9a8d-0b921ab41745
Autoimmunity PBMCs
c2a461b1-0c15-4047-9fcb-1f966fe55100
97,499
eb735cc9-d0a7-48fa-b255-db726bf365af
BCC and Normal - scRNA-seq data
e7c5ba7e-4be0-4696-af50-a07d0dc7aac5
152,189
34f12de7-c5e5-4813-a136-832677f98ac8
Bipolar cells of the human fovea and peripheral retina
8623d55f-d91c-41c2-ae68-ed2072fd268d
25,908
1d1c7275-476a-49e2-9022-ad1b1c793594
CD19-CARpos and CARneg T cells
460dfe21-0550-4521-92fe-db0f3036d8b0
18,122
14dc301f-d4fb-4743-a590-aa88d5f1df1a
COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs
ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3
836,148
8f126edf-5405-4731-8374-b5ce11f53e82
Circulating Immune cells -- CV19 infection, vaccination and HC
242c6e7f-9016-4048-af70-d631f5eea188
189,902
ecb739c5-fe0d-4b48-81c6-217c4d64eec4
Colon
2872f4b0-b171-46e2-abc6-befcf6de6306
41,650
7681c7d7-0168-4892-a547-6f02a6430ace
Combined human neural dataset
b62f728b-a7eb-4889-8162-b3d457de93b9
43,485
847fafc3-41a1-4a0d-9461-0328c88e9b13
Dissection: Amygdaloid complex (AMY) - Basolateral nuclear group (BLN) - lateral nucleus - La
7d3ab174-e433-40fc-a352-6fe71b1a19f9
28,984
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Amygdaloid complex (AMY) - Central nuclear group - CEN
7b316f62-7fa0-4b95-bac9-e90866038a85
42,699
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Amygdaloid complex (AMY) - basolateral nuclear group (BLN) - basolateral nucleus (basal nucleus) - BL
fe1a73ab-a203-45fd-84e9-0f7fd19efcbd
35,285
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Amygdaloid complex (AMY) - corticomedial nuclear group - CMN
1185a7d3-a9c1-4280-9ba5-d61895b15cac
38,331
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Angular gyrus (AnG)
f5b0810c-1664-4a62-ad06-be1d9964aa8b
110,752
d17249d2-0e6e-4500-abb8-e6c93fa1ac6f
Dissection: Anterior cingulate cortex (ACC)
be401db3-d732-408a-b0c4-71af0458b8ab
135,462
d17249d2-0e6e-4500-abb8-e6c93fa1ac6f
Dissection: Basal forebrain (BF) - septal nuclei - SEP
70e4f35b-c98c-45a1-9aa9-2053b07315dd
40,815
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Basal nuclei (BN) - Body of the Caudate - CaB
529bb209-9d7b-44da-bfa4-f6e4745c46c2
32,678
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Basal nuclei (BN) - Globus pallidus (GP) - External segment of globus pallidus - GPe
18500fcd-9960-49cb-8a8e-7d868dc14efe
50,830
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Basal nuclei (BN) - Globus pallidus (GP) - Internal segment of globus pallidus - GPi
ca20e2ac-5676-4158-b5d0-0c2b15898b19
33,968
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Basal nuclei (BN) - Putamen - Pu
f5a04dff-d394-4023-8811-65494e8bb11d
34,416
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Body of hippocampus (HiB) - Rostral CA1-CA3
182f6a56-7360-4924-a74e-1772e07b3031
28,724
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Body of hippocampus (HiB) - Rostral CA3
d5452b83-7c3d-4d7c-ab7a-c7fece7196c5
8,077
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Body of hippocampus (HiB) - Rostral DG-CA4
715327a6-7978-4896-ba91-69d6b04dbbfb
40,191
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebellum (CB) - Cerebellar Vermis - CBV
4976b234-9028-4b4b-8a2f-8ac59d636219
71,874
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebellum (CB) - Cerebellar deep nuclei - CbDN
095940cb-7422-4510-96e2-cbafd961eb88
52,045
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebellum (CB) - Lateral hemisphere of cerebellum - CBL
a59ba9fa-1407-4f15-8c56-d3637421570d
28,028
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Anterior parahippocampal gyrus, posterior part (APH) - Medial entorhinal cortex - MEC
52ea546e-9229-40ef-b048-a2e694dd73e8
50,362
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Caudal cingulate gyrus (CgGC) - A23
e5b1115b-a486-49bb-bda3-8261822836e0
35,359
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Cingulate gyrus, retrosplenial (CgGrs) - A29-A30
a84face4-eb30-4f43-994f-c6a13a097808
34,078
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Cuneus, caudal part - Peristriate Cortex - V2
ed33c203-233a-476a-a56b-28da945fdd32
32,638
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Cuneus, rostral part - Area Prostriata - Pro
ff7d15fa-f4b6-4a0e-992e-fd0c9d088ded
28,051
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Inferior frontal gyrus (IFG) - Ventrolateral prefrontal cortex - A44-A45
6ed0bb6c-a9e3-4ba6-9436-7c8fd4e206f0
38,259
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Inferior temporal gyrus - ITG
1cf24082-59de-4029-ac81-6e398768af3a
29,522
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Long insular gyri (LIG) - Dysgranular insular cortex - Idg
27d91086-cfe3-4e33-9282-bd1246e5ce8e
39,696
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Middle Temporal Gyrus - MTG
e1f595f6-ba2c-495e-9bee-7056f116b1e4
107,301
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Occipitotemporal (fusiform) gyrus, temporal part (FuGt) - Temporal area TF
f8dda921-5fb4-4c94-a654-c6fc346bfd6d
31,899
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Parietal operculum (PaO) - Gustatory cortex - A43
7db0c178-b0a4-442f-ba54-e9e1633a84bb
42,834
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Posterior intermediate orbital gyrus (POrG) - Caudal division of OFCi - A13
d582f63a-3c88-4e38-8cd3-8682dbe40f64
34,919
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Precentral gyrus (PrCG) - Primary motor cortex - M1C
f32c2c13-bb1a-4ffd-a457-60b64ecfa4cb
116,576
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Rostral gyrus (RoG) - Dorsal division of MFC - A32
4d43082e-59cd-43ac-b77d-54d55519c881
24,808
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Superior Temporal Gyrus - STG
88a01d4a-5197-45be-b5ae-e019aef43376
40,565
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Superior occipital gyrus (SOG) - Areas 19 and MT - A19
fa554686-fc07-44dd-b2de-b726d82d26ec
29,674
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Supramarginal gyrus (SMG) - A40
d288b10a-643e-44bd-b451-96e9588b2ee5
39,053
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Supraparietal lobule (SPL) - Posterosuperior (dorsal) parietal cortex - A5-A7
639ffc23-14db-4060-9027-3c90314200f8
35,290
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Temporal pole (TP) - Temporopolar area - A38
c2aad8fc-b63b-4f9b-9cfd-baf7bc9c1771
37,642
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Dorsolateral prefrontal cortex (DFC)
716a4acc-919e-4326-9672-ebe06ede84e6
113,339
d17249d2-0e6e-4500-abb8-e6c93fa1ac6f
Dissection: Epithalamus - ETH
93131426-0124-4ab4-a013-9dfbcd99d467
24,327
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Extended amygdala (EXA) - Bed nucleus of stria terminalis and nearby - BNST
1b767f95-d0a0-4a3d-b394-cc665d86c3dc
34,933
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Head of hippocampus (HiH) - Tail of Hippocampus (HiT) - Subicular cortex - Sub
19b21f40-db42-4a71-a0d6-913e83b17784
41,568
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Head of hippocampus (HiH) - Uncal CA1
acae7679-d077-461c-b857-ee6ccfeb267f
39,147
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Head of hippocampus (HiH) - Uncal CA1-CA3
3f56901c-dd4a-47d6-b60b-7b0c0111cfb2
37,911
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Head of hippocampus (HiH) - Uncal DG-CA4
4724c395-0c46-46d2-81f7-60fd271fb488
35,350
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Hypothalamus (HTH) - mammillary region of HTH (HTHma) - tuberal region of HTH - HTHtub
f20f44ef-a0d4-4d94-87de-037fd47141f0
18,728
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Hypothalamus (HTH) - preoptic region of HTH - HTHpo (medial preoptic nucleus, MPN) - supraoptic region of HTH - HTHso (paraventricular nucleus, PV)
03d38670-1444-4001-bc53-9936e61d9b20
20,027
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Hypothalamus (HTH) - supraoptic region of HTH - HTHso
22658f4f-9268-41ad-8828-cc53f4baa9fa
12,557
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Hypothalamus (HTH) - supraoptic region of HTH - HTHso (anterior hypothalamic nucleus, AHN) - tuberal region of HTH - HTHtub (ventromedial and dorsomedial hypothalamic nucleic nuclei, VMH, DMH)
35c8a04c-8639-4d15-8228-765d8d93fc96
16,753
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Midbrain (M) - Inferior colliculus and nearby nuclei - IC
5e5ab909-f73f-4b57-98a0-6d2c5662f6a4
32,306
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Midbrain (M) - Periaqueductal gray and Dorsal raphe nucleus - PAG-DR
c5cfa2b7-abb1-4a50-908f-707b54ca606b
14,094
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Midbrain (M) - Periaqueductal gray and nearby nuclei - PAG
9372df2d-13d6-4fac-980b-919a5b7eb483
33,794
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Midbrain (M) - Pretectal region - PTR
d6a5b240-cc8f-45c1-ad36-2fc291e15e8e
25,875
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Midbrain (M) - Substantia Nigra - SN
52f18bc3-52d9-487b-bf8f-f0b7aa684b09
59,505
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Midbrain (M) - Substantia Nigra, Red Nucleus, and nearby nuclei - SN-RN
9ec34295-ab16-47e2-af33-b884143e520b
49,110
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Midbrain (M) - Superior colliculus and nearby nuclei - SC
a4116666-d295-4443-a174-0acc283f92c4
29,907
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Myelencephalon (medulla oblongata) (Mo) - afferent nuclei of cranial nerves in medulla oblongata - MoAN
07b1d7c8-5c2e-42f7-9246-26f746cd6013
27,210
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Myelencephalon (medulla oblongata) (Mo) - medullary reticular formation (MoRF) & efferent nuclei of cranial nerves in the medulla oblongata (MoEN) - MoRF-MoEN
f9034091-2e8f-4ac6-9874-e7b7eb566824
23,120
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Myelencephalon (medulla oblongata) (Mo) - precerebellar nuclei (PrCbN) - inferior olive - IO
1a018108-b4b6-457b-ba15-046d5e98c169
21,534
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Myelencephalon (medulla oblongata) (Mo) - sensory relay nuclei in medulla oblongata - MoSR
0ee5ae70-c3f5-473f-bd1c-287f4690ffc5
13,623
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Paleocortex (PalCx) - Piriform cortex - Pir
d02287f3-408b-438d-9131-999e460cbd0e
36,941
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Perirhinal cortex (area 35) (A35) - rostral subdivision of area 35 - A35r
8039c63d-08b0-4fc9-af0f-5b57f08ca0da
17,535
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Pons (Pn) - Pontine Nucleus - PN
64f4ad90-a422-400a-944d-4ce0f39594a7
33,641
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Pons (Pn) - Pontine reticular formation (PnRF) - parabrachial nuclei - PB
f3565fda-499a-4d20-bd92-563c09954c42
24,155
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Pons (Pn) - Pontine reticular formation - PnRF
7c1c3d47-3166-43e5-9a95-65ceb2d45f78
49,512
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Pons (Pn) - afferent nuclei of cranial nerves in pons - PnAN
77044335-0ac5-4406-9b3f-8cdd3656d67b
23,349
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Pons (Pn) - efferent nuclei of cranial nerves in pons - PnEN
900fdf13-150d-4695-9f8c-4c09105ba2eb
47,416
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Pons (Pn) - other nuclei in pontine tegmentum (XPnTg) - dorsal tegmental nucleus - DTg
7cd3c321-e487-4b51-a8af-9bf671b59fe5
26,095
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Primary auditory cortex(A1)
e2808a6e-e2ea-41b9-b38c-4a08f1677f02
139,054
d17249d2-0e6e-4500-abb8-e6c93fa1ac6f
Dissection: Primary somatosensory cortex (S1)
93cb76aa-a84b-4a92-8e6c-66a914e26d4c
153,159
d17249d2-0e6e-4500-abb8-e6c93fa1ac6f
Dissection: Primary visual cortex(V1)
8d1dd010-5cbc-43fb-83f8-e0de8e8517da
241,077
d17249d2-0e6e-4500-abb8-e6c93fa1ac6f
Dissection: Spinal cord - SpC
090da8ea-46e8-40df-bffc-1f78e1538d27
24,190
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Tail of Hippocampus (HiT) - Caudal Hippocampus - CA4-DGC
9f499d32-400d-4c42-ac9a-fb1481844fee
56,367
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - Anterior nuclear complex - ANC
e8681d74-ac9e-4be5-be14-1cf1bbd54dd7
31,307
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - Lateral nuclear complex of thalamus (LNC) - ventral group of lateral nucleus - VLN
a7b4f565-691d-43ea-bf4a-d2d1d52bb4b4
27,111
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - Subthalamic nucleus and nearby - STH
a5b5d1f3-dd8b-44f6-a685-15f0f741c062
20,162
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - intralaminar nuclear complex (ILN) - posterior group of intralaminar nuclei (PILN) - centromedian and parafasicular nuclei - CM and Pf
367b55f4-d543-49aa-90e8-4765fcb8c687
24,354
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - intralaminar nuclear complex (ILN) - posterior group of intralaminar nuclei (PILN) - centromedian nucleus of thalamus - CM
364348b4-bc34-4fe1-a851-60d99e36cafa
12,944
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - lateral nuclear complex of thalamus (LNC) - Pulvinar of thalamus - Pul
ecd9230d-c571-4dab-abd3-8b54c74833f0
46,453
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - lateral nuclear complex of thalamus (LNC) - lateral posterior nucleus of thalamus + ventral posterior lateral nucleus - LP + VPL
fbf173f9-f809-4d84-9b65-ae205d35b523
17,660
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - lateral nuclear complex of thalamus (LNC) - lateral posterior nucleus of thalamus - LP
381aa407-317a-40ef-8048-7ce0eacc4266
26,172
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - posterior nuclear complex of thalamus (PoN) - lateral geniculate nucleus (LG)
d2514440-d747-4d8d-b2c7-b58ef8b71fbe
48,856
283d65eb-dd53-496d-adb7-7570c7caa443
Epithelial Compartment
ed880090-465d-4477-9d98-70838ca288e3
242,613
9432ae97-4803-4b9f-8f64-2b41e42ad3cb
Esophagus Epithelium
b07fb54c-d7ad-4995-8bb0-8f3d8611cabe
87,947
4d74781b-8186-4c9a-b659-ff4dc4601d91
Fallopian tube RNA
90d4a63b-5c02-43eb-acde-c49345681601
60,574
d36ca85c-3e8b-444c-ba3e-a645040c6185
Fetal lung + Pan-fetal immune
350237e0-9f48-4cbd-9140-3b44495549f3
670,749
ec329aed-22bc-4d6e-8935-8282dcb1acac
Figure 1
5d3fc988-765d-48ba-bfb5-151ef2988cac
49,109
7dd599c5-d25d-40c0-b1a6-8789791ca808
Figure 1 - A cell atlas of human thymic development defines T cell repertoire formation
cda2c8cd-be1c-42e5-b2cd-162caa1c4ce7
255,901
de13e3e2-23b6-40ed-a413-e9e12d7d3910
Figure 3
e500acbf-f166-4c46-b290-f93506cf26d3
37,428
7dd599c5-d25d-40c0-b1a6-8789791ca808
Fovea - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution
babbf9f3-f482-45a5-ba76-c41f4c2f503e
19,768
2f4c738f-e2f3-4553-9db2-0582a38ea4dc
Fresh samples (single cell)
6c87755e-a671-41a8-9c7e-4e43b850a57b
157,531
a96133de-e951-4e2d-ace6-59db8b3bfb1d
Full dataset of single-cell RNA-seq profiles from 9 developmental tissues across gestation (4-17 pcw)
fd072bc3-2dfb-46f8-b4e3-467cb3223182
908,046
b1a879f6-5638-48d3-8f64-f6592c1b1561
Global Atlas
de5416ef-bbfa-41f3-99d4-01a3554173f5
621,200
9432ae97-4803-4b9f-8f64-2b41e42ad3cb
HNOCA Extended: The Human Neural Organoid Atlas
d7f5d8d0-6150-48d7-b094-c34286ad11a1
1,920,454
de379e5f-52d0-498c-9801-0f850823c847
Healthy and IFALD pediatric and adult human liver tissue
84cfa5aa-a0d1-415e-ac47-eb66c9cf8170
81,001
ff69f0ee-fef6-4895-9f48-6c64a68c8289
Horizontal cells of the human fovea and peripheral retina
2f6a20f1-173d-4b8d-860b-c47ffea120fa
2,868
1d1c7275-476a-49e2-9022-ad1b1c793594
Human Fetal Retina Atlas
aecc2743-4ff2-4b55-ac8c-a1ff76fc4bb4
108,838
c11009b8-b113-4a99-9890-78b2f9df9d79
Human dermal fibroblast atlas
a19d1667-a7b5-4556-9e5f-f9bfa690c0f1
108,440
3c4f0970-7614-43de-beb7-6128b3cb74ed
Human healthy adult skin scRNA-seq data
f0f0d7c4-3bec-428e-9539-c99d36548d96
195,739
73f82ac8-15cc-4fcd-87f8-5683723fce7f
Human muscle cells and nuclei
b3c9904b-2ffd-4038-8620-ee1c5b072e9c
183,161
2d40e6a7-f2fd-49ba-9db9-6b97e4c6dad5
Immune Compartment
5a9cfb44-494a-4540-8db8-7143b1bb5a6f
274,555
9432ae97-4803-4b9f-8f64-2b41e42ad3cb
Individual Single-Cell RNA-seq PBMC Data from Schulte-Schrepping et al.
5e717147-0f75-4de1-8bd2-6fda01b8d75f
90,957
b9fc3d70-5a72-4479-a046-c2cc1ab19efc
Integrated cancer cell-specific single-cell RNA-seq datasets of immune checkpoint blockade-treated patients
7b20c613-9add-43d1-87e9-defd3d9b9f8c
355,941
61e422dd-c9cd-460e-9b91-72d9517348ef
Krasnow Lab Human Lung Cell Atlas, 10X
8c42cfd0-0b0a-46d5-910c-fc833d83c45e
65,662
5d445965-6f1a-4b68-ba3a-b8f765155d3a
L23IT - neocortex: Human variation study (HVS)
1fc48734-35ee-4372-885c-95fd2674c75a
79,631
35928d1c-36fc-4f93-9a8d-0b921ab41745
L4IT - neocortex: Human variation study (HVS)
9ea52f85-a35e-4b5b-9207-e2f1de7dbbcd
35,171
35928d1c-36fc-4f93-9a8d-0b921ab41745
L56NP - neocortex: Human variation study (HVS)
0de831e0-a525-4ec5-b717-df56f2de2bf0
6,133
35928d1c-36fc-4f93-9a8d-0b921ab41745
Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients
9dbab10c-118d-496b-966a-67f1763a6b7d
1,462,702
0a839c4b-10d0-4d64-9272-684c49a2c8ba
Living donor kidney
0bae7ebf-eb54-46a6-be9a-3461cecefa4c
27,675
dc3a5256-5c39-4a21-ac0c-4ede3e7b2323
Lung Parenchyma
2672b679-8048-4f5e-9786-f1b196ccfd08
57,019
4d74781b-8186-4c9a-b659-ff4dc4601d91
MSK SPECTRUM – All cells
b252b015-b488-4d5c-b16e-968c13e48a2c
927,205
4796c91c-9d8f-4692-be43-347b1727f9d8
MicroPVM - neocortex: Human variation study (HVS)
b6e502d7-0d07-408e-a291-91b63af0a40a
3,934
35928d1c-36fc-4f93-9a8d-0b921ab41745
Non-neuronal cells of the human fovea and peripheral retina
bc7260e0-54cf-4b0b-823d-93f5b850f757
22,125
1d1c7275-476a-49e2-9022-ad1b1c793594
Non-pregnant Uterus (Endometrium - All)
9ddea8d9-cc4c-420a-90f6-880996f808d4
100,307
32f2fd23-ec74-486f-9544-e5b2f41725f5
OPC - neocortex: Human variation study (HVS)
31285bcd-9a28-48ce-8cc0-543af80261d3
11,244
35928d1c-36fc-4f93-9a8d-0b921ab41745
Oligo - neocortex: Human variation study (HVS)
e34f3f89-3a48-4173-a06a-9e9803f2e2b9
57,855
35928d1c-36fc-4f93-9a8d-0b921ab41745
Organoid
4023a2bc-6325-47db-bfdf-9639e91042c2
70,495
2d2e2acd-dade-489f-a2da-6c11aa654028
Organoid - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution
7e7f63c5-d964-40be-83de-ecbcccafd233
43,857
2f4c738f-e2f3-4553-9db2-0582a38ea4dc
PBMC
2a498ace-872a-4935-984b-1afa70fd9886
422,220
03f821b4-87be-4ff4-b65a-b5fc00061da7
PBMCs
fa8605cf-f27e-44af-ac2a-476bee4410d3
59,506
0434a9d4-85fd-4554-b8e3-cf6c582bb2fa
Periphery - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution
ccfdcad0-7104-46b9-addf-fd66a2a15907
34,723
2f4c738f-e2f3-4553-9db2-0582a38ea4dc
Photoreceptor cells of the human fovea and peripheral retina
7b75b2c4-6d99-40be-9a61-391455d859e6
9,070
1d1c7275-476a-49e2-9022-ad1b1c793594
Pregnant Uterus (All)
5bc42b88-bb76-4954-927b-8bb7369adc64
70,325
a9254216-6cd8-4186-b32c-349363777584
Retina
af8b241a-c72c-4470-b1a4-80e7336c6ab6
4,335
f8057c47-fcd8-4fcf-88b0-e2f930080f6e
Retina
d5c67a4e-a8d9-456d-a273-fa01adb1b308
19,694
3472f32d-4a33-48e2-aad5-666d4631bf4c
Retina
856c1b98-5727-49da-bf0f-151bdb8cb056
20,091
1a486c4c-c115-4721-8c9f-f9f096e10857
SL040
21722308-5091-4b63-9c07-4f116ab9a7b3
135,482
113a558a-e96e-4643-81db-140e95c58578
SL057
145dcf6a-2461-4fa3-a0af-7fc56db0bd33
123,236
113a558a-e96e-4643-81db-140e95c58578
Single cell RNA sequencing of follicular lymphoma
99950e99-2758-41d2-b2c9-643edcdf6d82
137,147
968834a0-1895-40df-8720-666029b3bbac
Single cell RNA-seq data from normal adult kidney tissue
0b4a15a7-4e9e-4555-9733-2423e5c66469
48,783
a98b828a-622a-483a-80e0-15703678befd
Single-cell RNA-seq analysis of Interstitial Lung Disease (ILD) subtypes
f14bc322-1322-4184-8d16-409557525ea5
471,905
07e12576-b41b-4350-adfc-059bfc4328ea
Single-cell atlas of 24 hormone therapy naive localised prostate cancers
881e0e6b-a185-45f1-9b56-81606e91e7ff
68,322
bdac7a53-fe34-4f04-8c46-f9bd5297c099
Single-cell eQTL mapping identifies cell type specific genetic control of autoimmune disease
3faad104-2ab8-4434-816d-474d8d2641db
1,248,980
dde06e0f-ab3b-46be-96a2-a8082383c4a1
Single-cell transcriptomics of human T cells reveals tissue and activation signatures in health and disease
01209dce-3575-4bed-b1df-129f57fbc031
51,876
24d42e5e-ce6d-45ff-a66b-a3b3b715deaf
Single-nucleus transcriptome data from the dlPFC: Human
3c361813-5d5e-4868-bfe5-e7591e7b5381
172,120
e1fa9900-3fc9-4b57-9dce-c95724c88716
Skeletal_muscle
15d374d6-0dfd-4d8e-ade7-81f73dc921ee
201,575
854c0855-23ad-4362-8b77-6b1639e7a9fc
Sound Life Older Adult Females, CMV-negative
3cb646ab-d411-4e5b-89eb-082a786c953b
1,350,748
e9360edf-b0b7-4e01-bce8-e596814f13e7
Sound Life Older Adult Females, CMV-positive
aa32098f-f7b0-43f2-a00a-601d190aae94
2,596,111
e9360edf-b0b7-4e01-bce8-e596814f13e7
Sound Life Older Adult Males, CMV-negative
47e00f43-6176-44a5-b4d1-f88a1920fcab
1,750,565
e9360edf-b0b7-4e01-bce8-e596814f13e7
Sound Life Older Adult Males, CMV-positive
0c0c49a2-b96b-432f-98a4-1decf9929149
1,322,061
e9360edf-b0b7-4e01-bce8-e596814f13e7
Sound Life Young Adult Females, CMV-negative
46104f0b-9af5-466a-ae0f-56b8dc1969a2
2,616,824
e9360edf-b0b7-4e01-bce8-e596814f13e7
Sound Life Young Adult Females, CMV-positive
0a8e3443-c3e2-4918-84db-0495657d9175
1,234,234
e9360edf-b0b7-4e01-bce8-e596814f13e7
Sound Life Young Adult Males, CMV-negative
420d0f5d-b7ba-4b1e-88d0-44e9f733febd
1,712,244
e9360edf-b0b7-4e01-bce8-e596814f13e7
Sound Life Young Adult Males, CMV-positive
5fde5c9c-5b1e-4df5-982a-3f8e7635161f
1,206,761
e9360edf-b0b7-4e01-bce8-e596814f13e7
Spatiotemporal analysis of human intestinal development at single-cell resolution: All cells
9d5df009-eb76-43a3-b6cd-22017cc53700
76,592
60358420-6055-411d-ba4f-e8ac80682a2e
Spleen
644a578d-ffdc-446b-9679-e7ab4c919c13
94,256
4d74781b-8186-4c9a-b659-ff4dc4601d91
Sst - neocortex: Human variation study (HVS)
3079e9b0-c6db-45c8-b998-a4555a73968e
28,943
35928d1c-36fc-4f93-9a8d-0b921ab41745
Stromal Compartment
75011e96-ba37-4977-a539-fbf9f66a5e37
104,032
9432ae97-4803-4b9f-8f64-2b41e42ad3cb
Stromal cell diversity associated with immune evasion in human triple‐negative breast cancer
68b6114f-e990-4033-bfb3-c35536633aaa
24,271
16a4f6bc-2457-4e21-9b7a-9ba17c7b66c4
TI immune
a37f857c-779f-464e-9310-3db43a1811e7
201,072
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
TI stromal
0f4865d5-8000-4f68-8ac7-f5efea9e5e70
75,695
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
Tabula Sapiens - All Cells
53d208b0-2cfd-4366-9866-c3c6114081bc
1,136,218
e5f58829-1a66-40b5-a624-9046778e74f5
Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Adaptive Cells
21d3e683-80a4-4d9b-bc89-ebb2df513dde
246,964
ed9185e3-5b82-40c7-9824-b2141590c7f0
Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Innate Cells
30cd5311-6c09-46c9-94f1-71fe4b91813c
125,117
ed9185e3-5b82-40c7-9824-b2141590c7f0
Total - Cells of the human intestinal tract mapped across space and time
80a2c5b6-02e7-4fc0-9f12-179f5247c1bc
428,469
e33ffcd3-7cbf-4b8c-b0f4-85587ad5019a
UMAP of Cancer Data integration
7bb64315-9e5a-41b9-9235-59acf9642a3e
293,823
a18474f4-ff1e-4864-af69-270b956cee5b
UMAP visualization of all 12 datasets
de94c504-4b58-4f42-b68d-74a8e4892f0e
15,243
6d203948-a779-4b69-9b3f-1ee1dadc3980
VLMC - neocortex: Human variation study (HVS)
f9cfac8d-bff6-47a2-a1f6-503827d375f5
637
35928d1c-36fc-4f93-9a8d-0b921ab41745
Vip - neocortex: Human variation study (HVS)
93091496-be48-4122-b945-9af9c22a7535
28,718
35928d1c-36fc-4f93-9a8d-0b921ab41745
all cells
cff99df2-4904-44f7-9173-ff837f95606e
424,528
0d35c0fd-ef0b-4b70-bce6-645a4660e5fa
colon immune
518d9049-2a76-44f8-8abc-1e2b59ab5ba1
152,509
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
colon stromal
6cf3634d-e911-44ad-bf52-c747a9af3c01
39,433
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
fetal and neonatal human small intestine cells
3f32121d-126b-4e8d-9f69-d86502d2a1b1
36,359
7651ac1a-f947-463a-9223-a9e408a41989
human cHSPCs - Illumina
d9f3a82c-24bb-4277-b715-8ec92a33dd32
495,763
5542eeb0-96ef-4ab9-95ea-eb6abc178461
human cHSPCs - Ultima
4a5b00e0-1ba3-4fd4-af89-d3512eb20720
516,121
5542eeb0-96ef-4ab9-95ea-eb6abc178461
human endoderm organoid cell atlas
6725ee8e-ef5b-4e68-8901-61bd14a1fe73
806,646
6282a908-f162-44a2-99a3-8a942e4271b2
human_limb_scRNAseq
e595c979-c2de-4dad-8c02-8334a8e56de6
125,955
4fefa187-5d14-4f1e-915b-c892ed320aab
multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples
218acb0f-9f2f-4f76-b90b-15a4b7c7f629
1,263,676
436154da-bcf1-4130-9c8b-120ff9a888f2
normal - Single-cell analyses of renal cell cancers reveal insights into tumor microenvironment, cell of origin, and therapy response
f801b7a9-80a6-4d09-9161-71474deb58ae
6,044
1df8c90d-d299-4b2e-a54d-a5a80f36e780
scRNA-seq analysis of human fallopian tubes in healthy Vs. hydrosalphinx states
b693123e-95e6-4331-8b50-f367489a767e
77,536
fc77d2ae-247d-44d7-aa24-3f4859254c2c
scRNA-seq data - all cells
842c6f5d-4a94-4eef-8510-8c792d1124bc
714,331
4195ab4c-20bd-4cd3-8b3d-65601277e731
scRNA-seq for GZMK+CD8+ T cells Target A Specific Acinar Cell Type in Sjögren’s Disease
df1edb87-e512-43ae-b5f4-cb179cfc2bb4
94,227
21bbfaec-6958-46bc-b1cd-1535752f6304
scRNA-seq of foveal and parafoveal retina
f5be9ed2-5d41-4a52-91e4-4ff24ff84900
34,323
e9c73b68-e980-49c2-8d0d-1c9cab21507e
wilms
ea01c125-67a7-4bd3-a8b0-e1b53a011b7e
4,636
13d1c580-4b17-4b2e-85c4-75b36917413f