A multi-tissue single-cell tumor microenvironment atlas
b617ee1b-f8c8-4de9-b82b-e803ab93550d
391,963
3f7c572c-cd73-4b51-a313-207c7f20f188
Adult duodenum
ee195b7d-184d-4dfa-9b1c-51a7e601ac11
5,200
dfc09a93-bce0-4c77-893d-e153d1b7f9fa
All
13149914-ea03-4f01-8bf6-b793b667127b
1,665,937
4d8fed08-2d6d-4692-b5ea-464f1d072077
All annotated cells from infection 1
2ac76f1b-43ef-4271-8686-2f165570989f
48,226
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All annotated cells from infection 2
7f7faf6b-f11d-4f07-bc1c-188a4472748d
134,076
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All annotated cells from infection 3
7b55fe5c-d5c8-48e0-a1a3-54c5b9074f3f
125,530
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All annotated cells from infection 4
7c497c66-c2e2-4291-8b96-339e5e65f314
76,298
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All cell types of human eye
e6dad530-418b-47f9-af6e-472e56a7b314
100,055
939769a8-d8d2-4d01-abfc-55699893fd49
All cells from human liver dataset
e84f2780-51e8-4cfa-8aa0-13bbfef677c7
167,598
74e10dc4-cbb2-4605-a189-8a1cd8e44d8c
All major cell types in adult human retina
0129dbd9-a7d3-4f6b-96b9-1da155a93748
244,474
af893e86-8e9f-41f1-a474-ef05359b1fb7
An integrated cell atlas of the human lung in health and disease (full)
9f222629-9e39-47d0-b83f-e08d610c7479
2,282,447
6f6d381a-7701-4781-935c-db10d30de293
Bronchial scRNA-Seq Dataset
d2bc2703-a9b5-4949-b85d-61da7b9961b1
2,075
af500bec-a5d6-4569-9f50-4314f2e7a011
Cellular and transcriptional diversity over the course of human lactation
0920bcb8-4b3a-4e9d-a353-56f529fd3b32
48,478
e77163ca-8214-4e86-8b37-4f65a2ddae13
Central Cornea
a4157949-6f2a-40e2-b960-63f6e2bde918
37,485
63d03351-06be-478e-a0db-f7a653b6b19b
Ciliary Body
1196334f-a441-474a-95ee-400780941690
34,132
63d03351-06be-478e-a0db-f7a653b6b19b
Developing Human Atlas
9968be68-ab65-4a38-9e1a-c9b6abece194
155,232
dfc09a93-bce0-4c77-893d-e153d1b7f9fa
Dissection: Amygdaloid complex (AMY) - corticomedial nuclear group - CMN
1185a7d3-a9c1-4280-9ba5-d61895b15cac
38,331
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Basal forebrain (BF) - septal nuclei - SEP
70e4f35b-c98c-45a1-9aa9-2053b07315dd
40,815
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Basal forebrain (BF) - substantia innominata and nearby nuclei - SI
43b7e156-65b3-4a7b-8c7a-08528e4b21d0
38,205
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Basal nuclei (BN) - Globus pallidus (GP) - External segment of globus pallidus - GPe
18500fcd-9960-49cb-8a8e-7d868dc14efe
50,830
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Basal nuclei (BN) - Globus pallidus (GP) - Internal segment of globus pallidus - GPi
ca20e2ac-5676-4158-b5d0-0c2b15898b19
33,968
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Basal nuclei (BN) - Putamen - Pu
f5a04dff-d394-4023-8811-65494e8bb11d
34,416
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Body of hippocampus (HiB) - Rostral CA1-CA3
182f6a56-7360-4924-a74e-1772e07b3031
28,724
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Body of hippocampus (HiB) - Rostral DG-CA4
715327a6-7978-4896-ba91-69d6b04dbbfb
40,191
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebellum (CB) - Cerebellar Vermis - CBV
4976b234-9028-4b4b-8a2f-8ac59d636219
71,874
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebellum (CB) - Cerebellar deep nuclei - CbDN
095940cb-7422-4510-96e2-cbafd961eb88
52,045
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebellum (CB) - Lateral hemisphere of cerebellum - CBL
a59ba9fa-1407-4f15-8c56-d3637421570d
28,028
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Anterior parahippocampal gyrus (AG) - Lateral entorhinal cortex - LEC
46ff9dc2-3d87-4b36-91aa-ffa8aa13c52e
32,745
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Caudal cingulate gyrus (CgGC) - A23
e5b1115b-a486-49bb-bda3-8261822836e0
35,359
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Cingulate gyrus, retrosplenial (CgGrs) - A29-A30
a84face4-eb30-4f43-994f-c6a13a097808
34,078
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Cuneus, caudal part - Peristriate Cortex - V2
ed33c203-233a-476a-a56b-28da945fdd32
32,638
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Frontal agranular insular cortex - FI
421e5f54-5de7-425f-b399-34ead0651ce1
34,949
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Inferior frontal gyrus (IFG) - Ventrolateral prefrontal cortex - A44-A45
6ed0bb6c-a9e3-4ba6-9436-7c8fd4e206f0
38,259
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Perirhinal gyrus (PRG) - A35-A36
dd03ce70-3243-4c96-9561-330cc461e4d7
23,732
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Posterior intermediate orbital gyrus (POrG) - Caudal division of OFCi - A13
d582f63a-3c88-4e38-8cd3-8682dbe40f64
34,919
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Posterior parahippocampal gyrus (PPH) - TH-TL
a19b218b-1c0a-4618-b41f-7c216c623ec6
40,677
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Precentral gyrus (PrCG) - Primary motor cortex - M1C
f32c2c13-bb1a-4ffd-a457-60b64ecfa4cb
116,576
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Subcallosal Gyrus (SCG) - Subgenual (subcallosal) division of MFC - A25
77c1c785-809f-4065-8c54-6a0170783256
37,767
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Superior Temporal Gyrus - STG
88a01d4a-5197-45be-b5ae-e019aef43376
40,565
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Extended amygdala (EXA) - Bed nucleus of stria terminalis and nearby - BNST
1b767f95-d0a0-4a3d-b394-cc665d86c3dc
34,933
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Head of hippocampus (HiH) - Uncal CA1
acae7679-d077-461c-b857-ee6ccfeb267f
39,147
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Head of hippocampus (HiH) - Uncal CA1-CA3
3f56901c-dd4a-47d6-b60b-7b0c0111cfb2
37,911
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Head of hippocampus (HiH) - Uncal CA2-CA3
bac09168-940b-4b11-8d55-b4955f80b98d
12,461
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Head of hippocampus (HiH) - Uncal DG-CA4
4724c395-0c46-46d2-81f7-60fd271fb488
35,350
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Hypothalamus (HTH) - preoptic region of HTH - HTHpo (medial preoptic nucleus, MPN) - supraoptic region of HTH - HTHso (paraventricular nucleus, PV)
03d38670-1444-4001-bc53-9936e61d9b20
20,027
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Midbrain (M) - Inferior colliculus and nearby nuclei - IC
5e5ab909-f73f-4b57-98a0-6d2c5662f6a4
32,306
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Midbrain (M) - Periaqueductal gray and Dorsal raphe nucleus - PAG-DR
c5cfa2b7-abb1-4a50-908f-707b54ca606b
14,094
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Midbrain (M) - Substantia Nigra - SN
52f18bc3-52d9-487b-bf8f-f0b7aa684b09
59,505
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Myelencephalon (medulla oblongata) (Mo) - afferent nuclei of cranial nerves in medulla oblongata - MoAN
07b1d7c8-5c2e-42f7-9246-26f746cd6013
27,210
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Myelencephalon (medulla oblongata) (Mo) - medullary reticular formation (MoRF) & efferent nuclei of cranial nerves in the medulla oblongata (MoEN) - MoRF-MoEN
f9034091-2e8f-4ac6-9874-e7b7eb566824
23,120
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Myelencephalon (medulla oblongata) (Mo) - precerebellar nuclei (PrCbN) - inferior olive - IO
1a018108-b4b6-457b-ba15-046d5e98c169
21,534
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Myelencephalon (medulla oblongata) (Mo) - sensory relay nuclei in medulla oblongata - MoSR
0ee5ae70-c3f5-473f-bd1c-287f4690ffc5
13,623
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Pons (Pn) - Pontine reticular formation (PnRF) - parabrachial nuclei - PB
f3565fda-499a-4d20-bd92-563c09954c42
24,155
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Pons (Pn) - afferent nuclei of cranial nerves in pons - PnAN
77044335-0ac5-4406-9b3f-8cdd3656d67b
23,349
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Pons (Pn) - efferent nuclei of cranial nerves in pons - PnEN
900fdf13-150d-4695-9f8c-4c09105ba2eb
47,416
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Pons (Pn) - other nuclei in pontine tegmentum (XPnTg) - dorsal tegmental nucleus - DTg
7cd3c321-e487-4b51-a8af-9bf671b59fe5
26,095
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Spinal cord - SpC
090da8ea-46e8-40df-bffc-1f78e1538d27
24,190
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Tail of Hippocampus (HiT) - Caudal Hippocampus - CA1-CA3
d2b5efc1-14c6-4b5f-bd98-40f9084872d7
36,886
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Tail of Hippocampus (HiT) - Caudal Hippocampus - CA4-DGC
9f499d32-400d-4c42-ac9a-fb1481844fee
56,367
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - Lateral nuclear complex of thalamus (LNC) - ventral group of lateral nucleus - VLN
a7b4f565-691d-43ea-bf4a-d2d1d52bb4b4
27,111
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - Subthalamic nucleus and nearby - STH
a5b5d1f3-dd8b-44f6-a685-15f0f741c062
20,162
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - intralaminar nuclear complex (ILN) - posterior group of intralaminar nuclei (PILN) - centromedian and parafasicular nuclei - CM and Pf
367b55f4-d543-49aa-90e8-4765fcb8c687
24,354
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - intralaminar nuclear complex (ILN) - posterior group of intralaminar nuclei (PILN) - centromedian nucleus of thalamus - CM
364348b4-bc34-4fe1-a851-60d99e36cafa
12,944
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - lateral nuclear complex of thalamus (LNC) - Pulvinar of thalamus - Pul
ecd9230d-c571-4dab-abd3-8b54c74833f0
46,453
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - lateral nuclear complex of thalamus (LNC) - lateral posterior nucleus of thalamus - LP
381aa407-317a-40ef-8048-7ce0eacc4266
26,172
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - lateral nuclear complex of thalamus (LNC) - ventral posterior lateral nucleus - VPL
f6d9f2ad-5ec7-4d53-b7f0-ceb0e7bcd181
6,877
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - medial nuclear complex of thalamus (MNC) - mediodorsal nucleus of thalamus - MD
5a73f63f-18a2-49b5-b431-2c469c41a41b
20,916
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - posterior nuclear complex of thalamus (PoN) - lateral geniculate nucleus (LG)
d2514440-d747-4d8d-b2c7-b58ef8b71fbe
48,856
283d65eb-dd53-496d-adb7-7570c7caa443
Fovea - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution
babbf9f3-f482-45a5-ba76-c41f4c2f503e
19,768
2f4c738f-e2f3-4553-9db2-0582a38ea4dc
Full Dataset
0a2d7e87-c3c0-4ed2-86df-ae18811fcc16
61,747
7c4552fd-8a6d-4da3-9854-2dfa8baca8bf
HBCC_Cohort
5c97eeeb-7e52-44b3-b010-b832b1f5424c
1,486,324
84ce6837-548d-4a1f-919f-0bc0d9a3952f
Human Astrocytes 10x scRNA-seq
07760522-707a-4a1c-8891-dbd1226d6b27
33,506
b0f0b447-ac37-45b0-b1bf-5c0b7d871120
Human Microglia 10x scRNA-seq
f8d8b443-bca6-4c3c-9042-669dfb7f8030
33,041
b0f0b447-ac37-45b0-b1bf-5c0b7d871120
Human Non-DA Neurons 10x scRNA-seq
251b1a7e-d050-4486-8d50-4c2619eb0f46
91,479
b0f0b447-ac37-45b0-b1bf-5c0b7d871120
Human Nurr-Negative Nuclei 10x scRNA-seq
dea1aa78-c0a2-413f-b375-f91cce49e4d0
104,097
b0f0b447-ac37-45b0-b1bf-5c0b7d871120
Human Nurr-Positive Nuclei 10x scRNA-seq
92161459-9103-4379-ae34-73a38eee1d1d
80,576
b0f0b447-ac37-45b0-b1bf-5c0b7d871120
Human dermal fibroblast atlas
a19d1667-a7b5-4556-9e5f-f9bfa690c0f1
108,440
3c4f0970-7614-43de-beb7-6128b3cb74ed
Integrated cancer cell-specific single-cell RNA-seq datasets of immune checkpoint blockade-treated patients
7b20c613-9add-43d1-87e9-defd3d9b9f8c
355,941
61e422dd-c9cd-460e-9b91-72d9517348ef
Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis
4dd00779-7f73-4f50-89bb-e2d3c6b71b18
34,772
33d19f34-87f5-455b-8ca5-9023a2e5453d
Iris
9a281de7-cee5-4e80-8584-1929f46f152f
57,422
63d03351-06be-478e-a0db-f7a653b6b19b
Lens
489318a0-24c3-4f5c-b105-f084ed0ea026
13,900
63d03351-06be-478e-a0db-f7a653b6b19b
Lung
2f132ec9-24b5-422f-9be0-ccef03b4fe28
39,778
6ff3401b-d72c-4940-a00c-3f0792397082
MSSM_Cohort
37a17b78-4864-4a42-b67b-31c00962795a
4,140,453
84ce6837-548d-4a1f-919f-0bc0d9a3952f
Midgestational human neocortex cells
39ed7d98-676d-4b8d-9d0a-0f3b60914ead
118,647
e02201d7-f49f-401f-baf0-1eb1406546c0
Organoid - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution
7e7f63c5-d964-40be-83de-ecbcccafd233
43,857
2f4c738f-e2f3-4553-9db2-0582a38ea4dc
Pancreas
31f657dc-1875-4c4b-a5ca-ce63b3ef3a82
121,916
854c0855-23ad-4362-8b77-6b1639e7a9fc
Periphery - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution
ccfdcad0-7104-46b9-addf-fd66a2a15907
34,723
2f4c738f-e2f3-4553-9db2-0582a38ea4dc
RADC_Cohort
5e57cd50-8e42-42d6-940d-5c1660d06864
693,682
84ce6837-548d-4a1f-919f-0bc0d9a3952f
Retina
d5c67a4e-a8d9-456d-a273-fa01adb1b308
19,694
3472f32d-4a33-48e2-aad5-666d4631bf4c
SL057
145dcf6a-2461-4fa3-a0af-7fc56db0bd33
123,236
113a558a-e96e-4643-81db-140e95c58578
Single cell RNA sequencing of follicular lymphoma
99950e99-2758-41d2-b2c9-643edcdf6d82
137,147
968834a0-1895-40df-8720-666029b3bbac
Single cell RNA-seq of human heart cells
2e9d2f32-4cfb-49b5-b990-cbf4c241214e
49,359
20eea6c8-9d64-42c9-9b6f-c11b5249e0e9
Single nucleus transcriptomic profiling of human healthy hamstring tendon
06ef6b36-6c9b-4e10-8a94-d0baf274276e
10,533
d2684035-a36e-458e-96af-8e37930bfdf6
Single-cell atlas of peripheral immune response to SARS-CoV-2 infection
456e8b9b-f872-488b-871d-94534090a865
44,721
a72afd53-ab92-4511-88da-252fb0e26b9a
Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming
124744b8-4681-474a-9894-683896122708
15,457
c353707f-09a4-4f12-92a0-cb741e57e5f0
Single-cell transcriptomics of human T cells reveals tissue and activation signatures in health and disease
01209dce-3575-4bed-b1df-129f57fbc031
51,876
24d42e5e-ce6d-45ff-a66b-a3b3b715deaf
Single-nucleus transcriptomic analysis of human dorsal root ganglion neurons
d973ea15-3722-4bc8-a0e8-1d956d26e203
1,837
741abcf7-af4b-425d-88db-7e0b0d845719
TI epithelial
fe4b89d5-461e-440c-a5a8-621b37b122c0
154,136
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
TI immune
a37f857c-779f-464e-9310-3db43a1811e7
201,072
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
TI stromal
0f4865d5-8000-4f68-8ac7-f5efea9e5e70
75,695
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
Tabula Sapiens - All Cells
53d208b0-2cfd-4366-9866-c3c6114081bc
1,136,218
e5f58829-1a66-40b5-a624-9046778e74f5
Trabecular Meshwork and Corneal Scleral wedge
d967b47c-a9e6-4337-b2f4-977f690cb67f
52,309
63d03351-06be-478e-a0db-f7a653b6b19b
Transcriptome of human posterior ocular segment
9f1a899f-05a0-44c5-8aa9-39df61ae4324
139,978
7855daa4-3f34-4aae-b65a-87720c02e7cd
all cells
cff99df2-4904-44f7-9173-ff837f95606e
424,528
0d35c0fd-ef0b-4b70-bce6-645a4660e5fa
colon epithelial
5ce42b38-d867-487f-9b40-e8bb00b21d0b
97,788
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
colon immune
518d9049-2a76-44f8-8abc-1e2b59ab5ba1
152,509
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
colon stromal
6cf3634d-e911-44ad-bf52-c747a9af3c01
39,433
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples
218acb0f-9f2f-4f76-b90b-15a4b7c7f629
1,263,676
436154da-bcf1-4130-9c8b-120ff9a888f2
snRNA-seq data for human cerebella from 9-12 developmental stages
bab7432a-5cfe-45ea-928c-422d03c45cdd
180,956
72d37bc9-76cc-442d-9131-da0e273862db
snRNA-seq of the human quadriceps tendon
acd544d0-4d8b-46c7-98b3-fc48f7e6fdb7
12,808
579203e2-182f-47bc-8230-7aa47247e2a4