3-prime FGID data
6ceeaa86-9ceb-4582-b390-6d4dd6ff0572
89,849
a064d795-3b77-44ae-9fb5-beb57c567443
A multi-tissue single-cell tumor microenvironment atlas
b617ee1b-f8c8-4de9-b82b-e803ab93550d
391,963
3f7c572c-cd73-4b51-a313-207c7f20f188
A single-cell and spatially-resolved atlas of human breast cancers
9fddb063-056d-4202-8b8a-4b0ee531d3ce
100,064
dea97145-f712-431c-a223-6b5f565f362a
Activated PBMCs - Expanded cohort CITE-seq
3c75a463-6a87-4132-83a8-c3002624394d
95,064
bf325905-5e8e-42e3-933d-9a9053e9af80
Adult duodenum
ee195b7d-184d-4dfa-9b1c-51a7e601ac11
5,200
dfc09a93-bce0-4c77-893d-e153d1b7f9fa
All
13149914-ea03-4f01-8bf6-b793b667127b
1,665,937
4d8fed08-2d6d-4692-b5ea-464f1d072077
All annotated cells from infection 1
2ac76f1b-43ef-4271-8686-2f165570989f
48,226
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All annotated cells from infection 2
7f7faf6b-f11d-4f07-bc1c-188a4472748d
134,076
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All annotated cells from infection 3
7b55fe5c-d5c8-48e0-a1a3-54c5b9074f3f
125,530
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All annotated cells from infection 4
7c497c66-c2e2-4291-8b96-339e5e65f314
76,298
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All cell types of human eye
e6dad530-418b-47f9-af6e-472e56a7b314
100,055
939769a8-d8d2-4d01-abfc-55699893fd49
All cells from human liver dataset
e84f2780-51e8-4cfa-8aa0-13bbfef677c7
167,598
74e10dc4-cbb2-4605-a189-8a1cd8e44d8c
All cells types from snRNA-seq of human primary sclerosing cholangitis patients and healthy controls
1873a18a-66fd-4a4d-8277-a872c93f5b59
105,780
0c8a364b-97b5-4cc8-a593-23c38c6f0ac5
All major cell types in adult human retina
0129dbd9-a7d3-4f6b-96b9-1da155a93748
244,474
af893e86-8e9f-41f1-a474-ef05359b1fb7
An integrated cell atlas of the human lung in health and disease (full)
9f222629-9e39-47d0-b83f-e08d610c7479
2,282,447
6f6d381a-7701-4781-935c-db10d30de293
Bipolar cells of the human fovea and peripheral retina
8623d55f-d91c-41c2-ae68-ed2072fd268d
25,908
1d1c7275-476a-49e2-9022-ad1b1c793594
Bronchial scRNA-Seq Dataset
d2bc2703-a9b5-4949-b85d-61da7b9961b1
2,075
af500bec-a5d6-4569-9f50-4314f2e7a011
Cells of the human fetal kidney
8dc29642-be06-46dc-a289-8075915745d4
17,962
981b0c87-76d0-4edf-b201-58c52b5cd2f0
Central Cornea
a4157949-6f2a-40e2-b960-63f6e2bde918
37,485
63d03351-06be-478e-a0db-f7a653b6b19b
Cholangiocytes from human healthy donor liver samples
0c9a8cfb-6649-4d52-b418-6d8e56bd7afe
1,011
0c8a364b-97b5-4cc8-a593-23c38c6f0ac5
Colon
4e74d843-8d7a-497a-918a-f079ef141b6d
4,329
ff668d5d-5b3f-49ee-a007-ff0664bf35ec
Developing Human Atlas
9968be68-ab65-4a38-9e1a-c9b6abece194
155,232
dfc09a93-bce0-4c77-893d-e153d1b7f9fa
Dissection: Amygdaloid complex (AMY) - corticomedial nuclear group - CMN
1185a7d3-a9c1-4280-9ba5-d61895b15cac
38,331
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Angular gyrus (AnG)
f5b0810c-1664-4a62-ad06-be1d9964aa8b
110,752
d17249d2-0e6e-4500-abb8-e6c93fa1ac6f
Dissection: Anterior cingulate cortex (ACC)
be401db3-d732-408a-b0c4-71af0458b8ab
135,462
d17249d2-0e6e-4500-abb8-e6c93fa1ac6f
Dissection: Basal nuclei (BN) - Globus pallidus (GP) - External segment of globus pallidus - GPe
18500fcd-9960-49cb-8a8e-7d868dc14efe
50,830
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Basal nuclei (BN) - Globus pallidus (GP) - Internal segment of globus pallidus - GPi
ca20e2ac-5676-4158-b5d0-0c2b15898b19
33,968
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebellum (CB) - Cerebellar deep nuclei - CbDN
095940cb-7422-4510-96e2-cbafd961eb88
52,045
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebellum (CB) - Lateral hemisphere of cerebellum - CBL
a59ba9fa-1407-4f15-8c56-d3637421570d
28,028
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Cingulate gyrus, retrosplenial (CgGrs) - A29-A30
a84face4-eb30-4f43-994f-c6a13a097808
34,078
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Subcallosal Gyrus (SCG) - Subgenual (subcallosal) division of MFC - A25
77c1c785-809f-4065-8c54-6a0170783256
37,767
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Cerebral cortex (Cx) - Superior Temporal Gyrus - STG
88a01d4a-5197-45be-b5ae-e019aef43376
40,565
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Head of hippocampus (HiH) - Uncal CA1
acae7679-d077-461c-b857-ee6ccfeb267f
39,147
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Midbrain (M) - Periaqueductal gray and nearby nuclei - PAG
9372df2d-13d6-4fac-980b-919a5b7eb483
33,794
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Myelencephalon (medulla oblongata) (Mo) - afferent nuclei of cranial nerves in medulla oblongata - MoAN
07b1d7c8-5c2e-42f7-9246-26f746cd6013
27,210
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Myelencephalon (medulla oblongata) (Mo) - medullary reticular formation (MoRF) & efferent nuclei of cranial nerves in the medulla oblongata (MoEN) - MoRF-MoEN
f9034091-2e8f-4ac6-9874-e7b7eb566824
23,120
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Myelencephalon (medulla oblongata) (Mo) - precerebellar nuclei (PrCbN) - inferior olive - IO
1a018108-b4b6-457b-ba15-046d5e98c169
21,534
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Pons (Pn) - Pontine reticular formation - PnRF
7c1c3d47-3166-43e5-9a95-65ceb2d45f78
49,512
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Spinal cord - SpC
090da8ea-46e8-40df-bffc-1f78e1538d27
24,190
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - Subthalamic nucleus and nearby - STH
a5b5d1f3-dd8b-44f6-a685-15f0f741c062
20,162
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - intralaminar nuclear complex (ILN) - posterior group of intralaminar nuclei (PILN) - centromedian and parafasicular nuclei - CM and Pf
367b55f4-d543-49aa-90e8-4765fcb8c687
24,354
283d65eb-dd53-496d-adb7-7570c7caa443
Dissection: Thalamus (THM) - lateral nuclear complex of thalamus (LNC) - lateral posterior nucleus of thalamus - LP
381aa407-317a-40ef-8048-7ce0eacc4266
26,172
283d65eb-dd53-496d-adb7-7570c7caa443
Endothelial cells from human healthy donor liver samples
4ce8d8ec-b94c-4b79-afcb-b094336d8a78
9,422
0c8a364b-97b5-4cc8-a593-23c38c6f0ac5
Esophagus Epithelium
b07fb54c-d7ad-4995-8bb0-8f3d8611cabe
87,947
4d74781b-8186-4c9a-b659-ff4dc4601d91
Extended GBmap
56c4912d-2bae-4b64-98f2-af8a84389208
1,135,677
999f2a15-3d7e-440b-96ae-2c806799c08c
Fetal Bone Marrow (10x)
1a2e3350-28a8-4f49-b33c-5b67ceb001f6
103,228
793fdaec-5067-428a-a9db-ecefe135c945
Fetal Human Gut (6-11 PCW)
b46237d1-19c6-4af2-9335-9854634bad16
62,849
17481d16-ee44-49e5-bcf0-28c0780d8c4a
Figure 1
5d3fc988-765d-48ba-bfb5-151ef2988cac
49,109
7dd599c5-d25d-40c0-b1a6-8789791ca808
Figure 1 - A cell atlas of human thymic development defines T cell repertoire formation
cda2c8cd-be1c-42e5-b2cd-162caa1c4ce7
255,901
de13e3e2-23b6-40ed-a413-e9e12d7d3910
Figure 3
e500acbf-f166-4c46-b290-f93506cf26d3
37,428
7dd599c5-d25d-40c0-b1a6-8789791ca808
Fovea - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution
babbf9f3-f482-45a5-ba76-c41f4c2f503e
19,768
2f4c738f-e2f3-4553-9db2-0582a38ea4dc
Full Dataset
0a2d7e87-c3c0-4ed2-86df-ae18811fcc16
61,747
7c4552fd-8a6d-4da3-9854-2dfa8baca8bf
Global Atlas
de5416ef-bbfa-41f3-99d4-01a3554173f5
621,200
9432ae97-4803-4b9f-8f64-2b41e42ad3cb
HBCC_Cohort
5c97eeeb-7e52-44b3-b010-b832b1f5424c
1,486,324
84ce6837-548d-4a1f-919f-0bc0d9a3952f
Hepatocyte-1 cells from human healthy donor liver samples
234c23d0-d6cd-4612-a40d-e5811727564b
53,015
0c8a364b-97b5-4cc8-a593-23c38c6f0ac5
Horizontal cells of the human fovea and peripheral retina
2f6a20f1-173d-4b8d-860b-c47ffea120fa
2,868
1d1c7275-476a-49e2-9022-ad1b1c793594
Human Fetal Retina Atlas
aecc2743-4ff2-4b55-ac8c-a1ff76fc4bb4
108,838
c11009b8-b113-4a99-9890-78b2f9df9d79
Ileum
248cf7bf-508b-4c28-a2fd-cabe2ab956aa
5,980
ff668d5d-5b3f-49ee-a007-ff0664bf35ec
Individual Single-Cell RNA-seq PBMC Data from Schulte-Schrepping et al.
5e717147-0f75-4de1-8bd2-6fda01b8d75f
90,957
b9fc3d70-5a72-4479-a046-c2cc1ab19efc
Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis
4dd00779-7f73-4f50-89bb-e2d3c6b71b18
34,772
33d19f34-87f5-455b-8ca5-9023a2e5453d
Krasnow Lab Human Lung Cell Atlas, 10X
8c42cfd0-0b0a-46d5-910c-fc833d83c45e
65,662
5d445965-6f1a-4b68-ba3a-b8f765155d3a
Lung
2f132ec9-24b5-422f-9be0-ccef03b4fe28
39,778
6ff3401b-d72c-4940-a00c-3f0792397082
Lung Parenchyma
2672b679-8048-4f5e-9786-f1b196ccfd08
57,019
4d74781b-8186-4c9a-b659-ff4dc4601d91
MSSM_Cohort
37a17b78-4864-4a42-b67b-31c00962795a
4,140,453
84ce6837-548d-4a1f-919f-0bc0d9a3952f
Macrophage cells from human healthy donor liver samples
b550fd94-97e0-42e2-90f7-7434781ea2f8
11,127
0c8a364b-97b5-4cc8-a593-23c38c6f0ac5
Mature kidney dataset: full
9ea768a2-87ab-46b6-a73d-c4e915f25af3
40,268
120e86b4-1195-48c5-845b-b98054105eec
Molecular characterization of selectively vulnerable neurons in Alzheimer’s Disease: Entorhinal Cortex
2727d83a-0af0-443a-bff8-58dc7028289a
42,528
180bff9c-c8a5-4539-b13b-ddbc00d643e6
Nasal scRNA-Seq Dataset
e3cc5b85-62ec-4add-bee3-73c8fd11e59d
34,833
af500bec-a5d6-4569-9f50-4314f2e7a011
Natural killer T cells from human healthy donor liver samples
43560d7c-acd6-4ede-830d-c9ffc6cd0862
16,665
0c8a364b-97b5-4cc8-a593-23c38c6f0ac5
Non-neuronal cells of the human fovea and peripheral retina
bc7260e0-54cf-4b0b-823d-93f5b850f757
22,125
1d1c7275-476a-49e2-9022-ad1b1c793594
Non-pregnant Uterus (Endometrium - All)
9ddea8d9-cc4c-420a-90f6-880996f808d4
100,307
32f2fd23-ec74-486f-9544-e5b2f41725f5
Non-pregnant Uterus (Endometrium - Organoid)
76150f40-1989-4977-9e23-696e72d59d9e
118,672
32f2fd23-ec74-486f-9544-e5b2f41725f5
Olah et al (2020) Single-cell Human Microglia
a1b9c51e-a408-4f7f-bccb-abefe20ae2a5
16,245
fcb3d1c1-03d2-41ac-8229-458e072b7a1c
Organoid - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution
7e7f63c5-d964-40be-83de-ecbcccafd233
43,857
2f4c738f-e2f3-4553-9db2-0582a38ea4dc
Paediatric Human Gut (4-14y)
8e47ed12-c658-4252-b126-381df8d52a3d
22,502
17481d16-ee44-49e5-bcf0-28c0780d8c4a
Pancreas
31f657dc-1875-4c4b-a5ca-ce63b3ef3a82
121,916
854c0855-23ad-4362-8b77-6b1639e7a9fc
Periphery - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution
ccfdcad0-7104-46b9-addf-fd66a2a15907
34,723
2f4c738f-e2f3-4553-9db2-0582a38ea4dc
Pregnant Uterus (All)
5bc42b88-bb76-4954-927b-8bb7369adc64
70,325
a9254216-6cd8-4186-b32c-349363777584
RADC_Cohort
5e57cd50-8e42-42d6-940d-5c1660d06864
693,682
84ce6837-548d-4a1f-919f-0bc0d9a3952f
Rectum
80d7111d-f9fe-49fd-871e-6e618312c341
3,797
ff668d5d-5b3f-49ee-a007-ff0664bf35ec
SL040
21722308-5091-4b63-9c07-4f116ab9a7b3
135,482
113a558a-e96e-4643-81db-140e95c58578
Second Trimester Human Developing Brain Regions and Cortical Areas
ae4f8ddd-cac9-4172-9681-2175da462f2e
457,965
c8565c6a-01a1-435b-a549-f11b452a83a8
Single cell RNA sequencing of follicular lymphoma
99950e99-2758-41d2-b2c9-643edcdf6d82
137,147
968834a0-1895-40df-8720-666029b3bbac
Single cell RNA-seq of human heart cells
2e9d2f32-4cfb-49b5-b990-cbf4c241214e
49,359
20eea6c8-9d64-42c9-9b6f-c11b5249e0e9
Single cell transcriptomic profiling identifies molecular phenotypes of newborn human lung cells
6e00ccf7-0749-46ef-a999-dba785630d52
5,499
28e9d721-6816-48a2-8d0b-43bf0b0c0ebc
Single-Cell Transcriptome Profiling of Immature Human Thymocytes
11ff73e8-d3e4-4445-9309-477a2c5be6f6
71,732
83ed3be8-4cb9-43e6-9aaa-3fbbf5d1bd3a
Single-cell atlas of peripheral immune response to SARS-CoV-2 infection
456e8b9b-f872-488b-871d-94534090a865
44,721
a72afd53-ab92-4511-88da-252fb0e26b9a
Single-cell reconstruction of follicular remodeling in the human adult ovary
1f1c5c14-5949-4c81-b28e-b272e271b672
20,676
2902f08c-f83c-470e-a541-e463e25e5058
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy
bd65a70f-b274-4133-b9dd-0d1431b6af34
167,283
3f50314f-bdc9-40c6-8e4a-b0901ebfbe4c
Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming
124744b8-4681-474a-9894-683896122708
15,457
c353707f-09a4-4f12-92a0-cb741e57e5f0
Single-cell transcriptomic datasets of Renal cell carcinoma patients
5af90777-6760-4003-9dba-8f945fec6fdf
270,855
f7cecffa-00b4-4560-a29a-8ad626b8ee08
Single-cell transcriptomics of human T cells reveals tissue and activation signatures in health and disease
01209dce-3575-4bed-b1df-129f57fbc031
51,876
24d42e5e-ce6d-45ff-a66b-a3b3b715deaf
Single-nucleus cross-tissue molecular reference maps to decipher disease gene function
4ed927e9-c099-49af-b8ce-a2652d069333
209,126
a3ffde6c-7ad2-498a-903c-d58e732f7470
Spleen
644a578d-ffdc-446b-9679-e7ab4c919c13
94,256
4d74781b-8186-4c9a-b659-ff4dc4601d91
Stromal cell diversity associated with immune evasion in human triple‐negative breast cancer
68b6114f-e990-4033-bfb3-c35536633aaa
24,271
16a4f6bc-2457-4e21-9b7a-9ba17c7b66c4
TI epithelial
fe4b89d5-461e-440c-a5a8-621b37b122c0
154,136
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
TI immune
a37f857c-779f-464e-9310-3db43a1811e7
201,072
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
TI stromal
0f4865d5-8000-4f68-8ac7-f5efea9e5e70
75,695
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
Tabula Sapiens - All Cells
53d208b0-2cfd-4366-9866-c3c6114081bc
1,136,218
e5f58829-1a66-40b5-a624-9046778e74f5
Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Adaptive Cells
21d3e683-80a4-4d9b-bc89-ebb2df513dde
246,964
ed9185e3-5b82-40c7-9824-b2141590c7f0
Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Innate Cells
30cd5311-6c09-46c9-94f1-71fe4b91813c
125,117
ed9185e3-5b82-40c7-9824-b2141590c7f0
Trabecular Meshwork and Corneal Scleral wedge
d967b47c-a9e6-4337-b2f4-977f690cb67f
52,309
63d03351-06be-478e-a0db-f7a653b6b19b
Transcriptome of human posterior ocular segment
9f1a899f-05a0-44c5-8aa9-39df61ae4324
139,978
7855daa4-3f34-4aae-b65a-87720c02e7cd
UMAP visualization of all 12 datasets
de94c504-4b58-4f42-b68d-74a8e4892f0e
15,243
6d203948-a779-4b69-9b3f-1ee1dadc3980
all cells
cff99df2-4904-44f7-9173-ff837f95606e
424,528
0d35c0fd-ef0b-4b70-bce6-645a4660e5fa
ccRCC - Single-cell analyses of renal cell cancers reveal insights into tumor microenvironment, cell of origin, and therapy response
be39785b-67cb-4177-be19-a40ee3747e45
20,509
1df8c90d-d299-4b2e-a54d-a5a80f36e780
colon epithelial
5ce42b38-d867-487f-9b40-e8bb00b21d0b
97,788
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
colon immune
518d9049-2a76-44f8-8abc-1e2b59ab5ba1
152,509
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
colon stromal
6cf3634d-e911-44ad-bf52-c747a9af3c01
39,433
5c868b6f-62c5-4532-9d7f-a346ad4b50a7
immune cells
1e5bd3b8-6a0e-4959-8d69-cafed30fe814
35,699
03cdc7f4-bd08-49d0-a395-4487c0e5a168
multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples
218acb0f-9f2f-4f76-b90b-15a4b7c7f629
1,263,676
436154da-bcf1-4130-9c8b-120ff9a888f2
non-immune cells
4b6af54a-4a21-46e0-bc8d-673c0561a836
18,386
03cdc7f4-bd08-49d0-a395-4487c0e5a168
normal - Single-cell analyses of renal cell cancers reveal insights into tumor microenvironment, cell of origin, and therapy response
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scRNA-seq for GZMK+CD8+ T cells Target A Specific Acinar Cell Type in Sjögren’s Disease
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snRNA-seq of the human quadriceps tendon
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