A Unique Cellular Organization of Human Distal Airways and Its Disarray in Chronic Obstructive Pulmonary Disease
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115,788
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A molecular single-cell lung atlas of lethal COVID-19
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116,313
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A multi-tissue single-cell tumor microenvironment atlas
b617ee1b-f8c8-4de9-b82b-e803ab93550d
391,963
3f7c572c-cd73-4b51-a313-207c7f20f188
A single-cell and spatially-resolved atlas of human breast cancers
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100,064
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A single-cell atlas of the healthy breast tissues reveals clinically relevant clusters of breast epithelial cells
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31,696
c9706a92-0e5f-46c1-96d8-20e42467f287
Airway
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236,977
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All
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1,665,937
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All Cells
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370,115
4d82bd8e-8827-410b-8fc7-685b7dd92585
All annotated cells from infection 1
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48,226
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All annotated cells from infection 2
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134,076
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All annotated cells from infection 3
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125,530
2a9a17c9-1f61-4877-b384-b8cd5ffa4085
All cells
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71,752
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All cells and nuclei
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193,108
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An Integrated Single Cell Meta-atlas of Human Periodontitis
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105,918
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An integrated cell atlas of the human lung in health and disease (full)
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2,282,447
6f6d381a-7701-4781-935c-db10d30de293
Anomalous Epithelial Variations and Ectopic Inflammatory Response in Chronic Obstructive Pulmonary Disease
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57,918
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BCC and Normal - scRNA-seq data
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152,189
34f12de7-c5e5-4813-a136-832677f98ac8
Bronchial scRNA-Seq Dataset
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2,075
af500bec-a5d6-4569-9f50-4314f2e7a011
Bronchopulmonary dysplasia
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271,381
3a5dbf8a-9b3e-4309-b4c5-d8a024f83734
Cells of the human fetal kidney
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17,962
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Cellular and transcriptional diversity over the course of human lactation
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48,478
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Central Cornea
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37,485
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Combined samples
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147,137
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Developing Human Atlas
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155,232
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Epithelial Compartment
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242,613
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Epithelial bcc and normal_scRNAseq
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9,841
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Esophagus Epithelium
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87,947
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Fallopian tube RNA
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60,574
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Fallopian tube samples from pre- and post-menopausal humans
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131,218
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Figure 1
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49,109
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Figure 1 - A cell atlas of human thymic development defines T cell repertoire formation
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255,901
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Figure 3
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37,428
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Fresh samples (single cell)
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157,531
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Frozen samples (single nucleus)
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394,534
a96133de-e951-4e2d-ace6-59db8b3bfb1d
Full dataset of single-cell RNA-seq profiles from 9 developmental tissues across gestation (4-17 pcw)
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908,046
b1a879f6-5638-48d3-8f64-f6592c1b1561
Global Atlas
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621,200
9432ae97-4803-4b9f-8f64-2b41e42ad3cb
HBCA - global
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803,283
48259aa8-f168-4bf5-b797-af8e88da6637
HNOCA Extended: The Human Neural Organoid Atlas
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1,920,454
de379e5f-52d0-498c-9801-0f850823c847
Heart
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931,012
854c0855-23ad-4362-8b77-6b1639e7a9fc
High-Resolution Transcriptomic Landscape of the Human Submandibular Gland
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15,684
964581c3-b5ac-494d-9bd4-0dcb6fb058da
Human CellCards Multi-Study CellRef 1.0 Atlas
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347,970
f86d6317-7215-409e-bfda-3f4ded3dadaa
Human Trophoblast Organoids
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67,996
257ce7fb-ab27-4772-8a06-9fe8385816b2
Human adult ureter
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30,942
af286675-7167-4816-a907-c72d41b73d37
Human dermal fibroblast atlas
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108,440
3c4f0970-7614-43de-beb7-6128b3cb74ed
Human healthy adult skin scRNA-seq data
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195,739
73f82ac8-15cc-4fcd-87f8-5683723fce7f
Immune Compartment
5a9cfb44-494a-4540-8db8-7143b1bb5a6f
274,555
9432ae97-4803-4b9f-8f64-2b41e42ad3cb
Immune Response mechanisms in the cerebrospinal fluid in leptomeningeal disease at single cell resolution
0bf30b02-db97-4560-b9cd-0fe3588892af
72,695
573e2e06-8af0-4d96-bfdd-7d64a4bb9c21
Immune aging project - all cells
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1,281,499
cc431242-35ea-41e1-a100-41e0dec2665b
In vitro derived T cells, from Artificial Thymic Organoid protocol
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10,459
b1a879f6-5638-48d3-8f64-f6592c1b1561
Integrated HBCA
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2,122,065
48259aa8-f168-4bf5-b797-af8e88da6637
Integrated adult and foetal hearts
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60,668
43b45a20-a969-49ac-a8e8-8c84b211bd01
Integrated cancer cell-specific single-cell RNA-seq datasets of immune checkpoint blockade-treated patients
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355,941
61e422dd-c9cd-460e-9b91-72d9517348ef
Krasnow Lab Human Lung Cell Atlas, 10X
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65,662
5d445965-6f1a-4b68-ba3a-b8f765155d3a
Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients
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1,462,702
0a839c4b-10d0-4d64-9272-684c49a2c8ba
Late tip organoid
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20,475
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Lung
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39,778
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Lung Parenchyma
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57,019
4d74781b-8186-4c9a-b659-ff4dc4601d91
MSK SPECTRUM – All cells
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927,205
4796c91c-9d8f-4692-be43-347b1727f9d8
Molecular characterization of selectively vulnerable neurons in Alzheimer’s Disease: Entorhinal Cortex
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42,528
180bff9c-c8a5-4539-b13b-ddbc00d643e6
Nasal scRNA-Seq Dataset
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34,833
af500bec-a5d6-4569-9f50-4314f2e7a011
Non-pregnant Uterus (Endometrium - All)
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100,307
32f2fd23-ec74-486f-9544-e5b2f41725f5
Olah et al (2020) Single-cell Human Microglia
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16,245
fcb3d1c1-03d2-41ac-8229-458e072b7a1c
Oral and Craniofacial Atlas
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246,103
065ad318-59fd-4f8c-b4b1-66caa7665409
Pregnant Uterus (All)
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70,325
a9254216-6cd8-4186-b32c-349363777584
Single cell RNA sequencing of follicular lymphoma
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137,147
968834a0-1895-40df-8720-666029b3bbac
Single cell analysis of mouse and human prostate reveals novel fibroblasts with specialized distribution and microenvironment interactions - All Human Cells
574e9f9e-f8b4-41ef-bf19-89a9964fd9c7
83,451
4b54248f-2165-477c-a027-dd55082e8818
Single nucleus transcriptomic atlas of human foetal tendon
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91,859
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Single-Cell RNA Sequencing of Breast Tissues: Cell Subtypes and Cancer Risk Factors
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52,681
99f1515b-46a2-4bc4-94c3-f62659dc1eb4
Single-cell RNA-seq analysis of Interstitial Lung Disease (ILD) subtypes
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471,905
07e12576-b41b-4350-adfc-059bfc4328ea
Single-cell RNA-seq of the Adult Human Kidney (Version 1.5)
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225,177
0f528c8a-a25c-4840-8fa3-d156fa11086f
Single-cell analysis of prenatal and postnatal human cortical development
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709,372
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Single-cell atlas of 24 hormone therapy naive localised prostate cancers
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68,322
bdac7a53-fe34-4f04-8c46-f9bd5297c099
Single-cell multiomic profiling of human lungs across age groups
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46,500
625f6bf4-2f33-4942-962e-35243d284837
Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming
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15,457
c353707f-09a4-4f12-92a0-cb741e57e5f0
Single-nucleus cross-tissue molecular reference maps to decipher disease gene function
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209,126
a3ffde6c-7ad2-498a-903c-d58e732f7470
Single-nucleus transcriptome data from the dlPFC: Human
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172,120
e1fa9900-3fc9-4b57-9dce-c95724c88716
Skin
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68,036
43d4bb39-21af-4d05-b973-4c1fed7b916c
Spleen
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94,256
4d74781b-8186-4c9a-b659-ff4dc4601d91
Stromal Compartment
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104,032
9432ae97-4803-4b9f-8f64-2b41e42ad3cb
Stromal cell diversity associated with immune evasion in human triple‐negative breast cancer
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24,271
16a4f6bc-2457-4e21-9b7a-9ba17c7b66c4
Subpallial germinal zones and the developing human entorhinal cortex
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124,917
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Tabula Sapiens - All Cells
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1,136,218
e5f58829-1a66-40b5-a624-9046778e74f5
The single-cell lung cancer atlas (LuCA) -- extended atlas
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1,283,972
edb893ee-4066-4128-9aec-5eb2b03f8287
Trabecular Meshwork and Corneal Scleral wedge
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52,309
63d03351-06be-478e-a0db-f7a653b6b19b
Transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies
d41f45c1-1b7b-4573-a998-ac5c5acb1647
82,991
efd94500-1fdc-4e28-9e9f-a309d0154e21
Transcriptomic Analysis of Air-Liquid Interface Culture in Human Lung Organoids Reveals Regulators of Epithelial Differentiation
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5,594
e9cf4e8d-05ed-4d95-b550-af35ca219390
UMAP of Cancer Data integration
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293,823
a18474f4-ff1e-4864-af69-270b956cee5b
UMAP visualization of all 12 datasets
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15,243
6d203948-a779-4b69-9b3f-1ee1dadc3980
all cells
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424,528
0d35c0fd-ef0b-4b70-bce6-645a4660e5fa
human cHSPCs - Illumina
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495,763
5542eeb0-96ef-4ab9-95ea-eb6abc178461
human endoderm organoid cell atlas
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806,646
6282a908-f162-44a2-99a3-8a942e4271b2
human_limb_scRNAseq
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125,955
4fefa187-5d14-4f1e-915b-c892ed320aab
organoid
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8,556
ec329aed-22bc-4d6e-8935-8282dcb1acac
organoid
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9,619
92db8a7e-8761-4317-873f-15606c016ce5
progressive_plasticity_during_crc_metastasis_epithelial
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47,107
1cbfb478-2c7f-4d15-b522-9f74e9fe52a8
scRNA-seq analysis of human fallopian tubes in healthy Vs. hydrosalphinx states
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77,536
fc77d2ae-247d-44d7-aa24-3f4859254c2c
scRNA-seq data - all cells
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714,331
4195ab4c-20bd-4cd3-8b3d-65601277e731
scRNA-seq for GZMK+CD8+ T cells Target A Specific Acinar Cell Type in Sjögren’s Disease
df1edb87-e512-43ae-b5f4-cb179cfc2bb4
94,227
21bbfaec-6958-46bc-b1cd-1535752f6304
scRNA-seq of human ocular anterior segment: trabecular meshwork and ciliary body
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332,995
0cbf8ef8-87bd-4b51-8521-ec3f68183e11
scRNA-seq of human ocular surface: cornea, limbus, sclera – fetal data included
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815,769
0f7d022a-46c7-4e64-be4c-e34adbb78089
snRNA-seq data - all cells
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117,346
4195ab4c-20bd-4cd3-8b3d-65601277e731
snRNA-seq of human ocular anterior segment: trabecular meshwork and ciliary body
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1,102,250
0cbf8ef8-87bd-4b51-8521-ec3f68183e11
snRNA-seq of human ocular surface: cornea, limbus, sclera
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147,484
0f7d022a-46c7-4e64-be4c-e34adbb78089
snRNA-seq of human of the human retinal pigment epithelium and the choroid - fetal data included
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851,993
48c15b0c-6039-4e0f-9668-b6b3c0b830ad
snRNA-seq of human optic nerve and optic nerve head - all cells
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959,629
05e3d0fc-c9dd-4f14-9163-2b242b3bb5c2
snRNA-seq of human retina - all cells
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3,177,310
4c6eaf5c-6d57-4c76-b1e9-60df8c655f1e
snRNA-seq of human subcutaneous adipose tissue - all cells
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37,879
ba84c7ba-8d8c-4720-a76e-3ee37dc89f0b
thymus scRNA-seq atlas
29244e1d-02e6-4133-b411-516ef7474638
482,651
fc19ae6c-d7c1-4dce-b703-62c5d52061b4